E.coli

Wöchtl B, Gunzer F, Gerner W, Gasse H, Koch M, Bagó Z, Ganter M, Weissenböck H, Dinhopl N, Coldewey SM, von Altrock A, Waldmann KH, Saalmüller A, Zimmermann K, Steinmann J, Kehrmann J, Klein-Hitpass L, Blom J, Ehricht R, Engelmann I and Hennig-Pauka I; (2017)
Comparison of clinical and immunological findings in gnotobiotic piglets infected with Escherichia coli O104:H4 outbreak strain and EHEC O157:H7
Gut Pathogens; 2017; May 25; 9:30; DOI: 10.1186/s13099-017-0179-8

Surveillance of Extended-Spectrum Beta-Lactamase-Producing Escherichia coli in Dairy Cattle Farms in the Nile Delta, Egypt;
Sascha D. Braun, Marwa F. E. Ahmed, Hosny El-Adawy, Helmut Hotzel, Ines Engelmann, Daniel Weiß, Stefan Monecke and Ralf Ehricht
in Fratamico, P. M., DebRoy, C., Needleman, D. S., eds. (2017).
Emerging Approaches for Typing, Detection, Characterization, and Traceback of Escherichia coli.
Lausanne: Frontiers Media. doi: 10.3389/978-2-88945-135-7

Genetic makeup of Shiga toxin-producing Escherichia coli in relation to clinical symptoms and duration of shedding: a microarray analysis of isolates from Swedish children.
Matussek A, Jernberg C, Einemo IM, Monecke S, Ehricht R, Engelmann I, Löfgren S, Mernelius S. (2017)
Eur J Clin Microbiol Infect Dis. 2017 Apr 19. doi: 10.1007/s10096-017-2950-7

In silico serine β-lactamases analysis reveals a huge potential resistome in environmental and pathogenic species.
Brandt C, Braun SD, Stein C, Slickers P, Ehricht R, Pletz MW, Makarewicz O. (2017)
Sci Rep. 2017 Feb 24;7:43232. doi: 10.1038/srep43232.

Surveillance of extended-spectrum beta-lactamase-producing Escherichia coli in dairy cattle farms in the Nile delta, Egypt.
Braun SD, El-Adawy H, Ahmed M, Hotzel H, Engelmann I, Weiß D, Monecke S and Ehricht R (2016).
Front. Microbiol. 7:1020. doi: 10.3389/fmicb.2016.01020

Development of a rapid diagnostic assay based on magnetic bead purification of OXA-β-lactamase mRNA.
Brandt C, Zander E, Pfeifer Y, Braun SD, Ehricht R, Makarewicz O, Pletz MW
Future Microbiol. 2016 May 10.

Carbapenemase-producing Enterobacteriaceae: a 2-year surveillance in a hospital in Iaşi, Romania.
Braun SD, Dorneanu OS, Vremeră T, Reißig A, Monecke S, Ehricht R (2016)
Future Microbiol. 2016 Mar 14

Rapid Identification of Carbapenemase Genes in Gram-Negative
Bacteria with an Oligonucleotide Microarray-Based Assay.

Sascha D. Braun, Mathias Pletz, Stefan Monecke, Alexander Thürmer, Antje Ruppelt, Oliwia Makarewicz, Annett Reißig, Peter Slickers, Ralf Ehricht.
2014 July 28; PLoS ONE 9(7): e102232. doi:10.1371/journal.pone.0102232

Development of a Rapid Microarray-Based DNA Subtyping Assay for the Alleles of the Shiga toxins 1 and 2 of Escherichia coli.
Geue L, Stieber B, Monecke S, Engelmann I, Gunzer F, Slickers P, Braun SD, Ehricht R.
J Clin Microbiol. 2014 Jun 4. pii: JCM.01048-14.

Rapid Microarray-Based DNA Genoserotyping of Escherichia coli.
Geue L, Monecke S, Engelmann I, Braun S, Slickers P, Ehricht R.
Microbiol Immunol. 2013 Dec 3. doi: 10.1111/1348-0421.12120

Escherichia coli isolates from extraintestinal organs of livestock animals harbour diverse virulence genes and belong to multiple genetic lineages
Guanghui Wua, Ralf Ehricht, Muriel Mafura, Matthew Stokes, Noel Smith, Geoff C. Pritchard, Martin J. Woodward
Vet Microbiol. 2012 Nov 9;160(1-2):197-206. doi: 10.1016 / j.vetmic. 2012.05.029

Zoonotic agents in small ruminants kept on city farms in southern Germany
Schilling AK, Hotzel H, Methner U, Sprague LD, Schmoock G, El Adawy H, Ehricht R, Wöhr AC, Erhard M, Geue L.
Appl Environ Microbiol. 2012 Mar 23.

Presence of Enterohemorrhagic Escherichia coli ST678/O104:H4 in France prior to 2011.
Monecke S, Mariani-Kurkdjian P, Bingen E, Weill FX, Balière C, Slickers P, Ehricht R.;
Appl Environ Microbiol. 2011, Oct 14.
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Rapid Microarray-Based Genotyping of Enterohemorrhagic Escherichia coli Serotype O156:H25/H-/Hnt Isolates from Cattle and Clonal Relationship Analysis.
Geue L, Schares S, Mintel B, Conraths FJ, Müller E, Ehricht R.;
Appl Environ Microbiol. 2010, Jun 25.
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Supplement (xlsx)

Pathotyping Escherichia coli using miniaturised DNA-microarrays.
Anjum MF, Mafura M, Slickers P, Ballmer K, Kuhnert P, Woodward MJ, Ehricht R.; Appl Environ Microbiol. 2007, Jul 13.

Fast DNA-serotyping of Escherichia coli by oligonucleotide microarray.
Ballmer K, Korczak BM, Kuhnert P, Slickers P, Ehricht R, Hachler H;
J Clin Microbiol. 2006 Nov 15.

Use of Miniaturized Protein Arrays for Escherichia coli O Serotyping.
Anjum MF, Tucker JD, Sprigings KA, Woodward MJ, Ehricht R; Clin. Vaccine Immunol. 2006 May;13(5):561-7.

Use of Diagnostic Microarrays for Determination of Virulence Gene Patterns of
Escherichia coli K1, a Major Cause of Neonatal Meningitis.

Bozena Korczak, Joachim Frey, Jacques Schrenzel, Gerd Pluschke, Riccardo Pfister, Ralf Ehricht, and Peter Kuhnert; J. Clin. Microbiol. 2005 43: 1024-1031.